Fwd: new table format proposed by astropy dev community.
Patrick Dowler
patrick.dowler at nrc-cnrc.gc.ca
Thu Jan 15 20:11:45 CET 2015
-------- Forwarded Message --------
From: Kavelaars, JJ <JJ.Kavelaars at nrc-cnrc.gc.ca>
Interested in table file formats? There is some discussion of this
happening in astropy community, perhaps they would benefit from
insightful comment, see discussion at the github link below...
APE-6 : https://github.com/astropy/astropy-APEs/pull/7
Abstract
--------
Data tables in astronomical analysis frequently contain additional
metadata beyond just the column names and data values. Common
attributes include the numerical data type, the physical unit, and a
longer textual description of the column content. These attributes can
be represented in binary formats such as FITS, but the available options
for a text-only format are inadequate.
APE6 proposes to fill this void by specification of a standard for the
interchange of tabular data in a text-only format. The format handles
the key issue of serializing column specifications and table metadata by
using a YAML-encoded data structure. The actual tabular data are stored
in a standard character separated values (CSV) format, giving
compatibility with a wide variety of non-specialized CSV table readers.
Using YAML makes it extremely easy for applications *and humans* to read
both the standardized data format elements (e.g. column name, type,
description) as well as complex metadata structures. YAML also lends
itself to simple table modifications by humans in a plain text editor.
The reference Python implementation in ``astropy.io.ascii`` is
relatively straightforward and will provide a significant benefit of
allowing text serialization of most astropy Table objects, persistent
storage, and subsequent interchange with other users.
Although developed in the context of Astropy, there is nothing
astronomy-specific in this format and it could be useful for other
domains or languages. However, promoting that is beyond the scope of
this APE.
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